primeGSR is a program for gene tree inference that takes a known species tree into account. It is based on GSR, a probabilistic model integrating gene duplication, sequence evolution and a relaxed molecular clock for substitution rates, and efficient algorithms that enables genome-wide analysis of gene families.

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Citing our work

If you use primeGSR, please cite:
Åkerborg, Sennblad, Arvestad, Lagergren, Gene tree analysis using a Bayesian integrated model for genes, sequences, and rates, submitted.